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Clupeiformes of the CA-GSL

There are 9 species of Clupeiformes that are commonly found in the CA-GSL.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 9 total species, 9 of these species (100%) have COI barcodes (from this or any ocean).
  • There are a total of 707 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the CA-GSL region):
  • Of the 9 total species, 2 of these species (22%) have CA-GSL-collected COI barcodes.
  • There are a total of 5 "CA-GSL-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 9 total species in this region, 0 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the CA-GSL region, out of a total of 9 possible species:
    • There are COI barcodes for 9 species ( 100% coverage ), of which 2 species have barcodes sampled inside this region ( 22% coverage ).
      •
    • There are 12S barcodes for 9 species ( 100% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 9 species ( 100% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 1 species ( 11% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 0 species ( 0% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
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    Table Viewing Options   [ Species-only Summary, sorted by name (default) ]   or   [ Full Taxonomic Hierarchy ]   or   [ flat-text file of sorted species names ]


    Clupeiformes of the CA-GSL
    Taxa Name

    		Taxa
    Level    		Barcode
    Data?    		Number of
    Barcodes
    from
    any ocean    		Number of
    Barcodes
    from this region    		Barcode Locations and
    Species Occurence Map    		MZGdb Atlas
    v2023-m04-01

    2023-Apr-07
      Alosa aestivalis Species
    (1)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 29
      12S = 6
      16S = 7
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5003068

    R:1:1:1:0
      Alosa pseudoharengus Species
    (2)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 43
      12S = 10
      16S = 11
      18S = 0
      28S = 0
    		   COI = 3
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5003075

    R:1:1:1:0
      Alosa sapidissima Species
    (3)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 47
      12S = 11
      16S = 17
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5003076

    R:1:1:1:0
      Anchoa hepsetus Species
    (4)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 14
      12S = 1
      16S = 1
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5000157

    R:1:1:0:0
      Brevoortia tyrannus Species
    (5)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 336
      12S = 8
      16S = 4
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5000314

    R:1:1:0:0
      Clupea harengus Species
    (6)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 173
      12S = 111
      16S = 124
      18S = 6
      28S = 0
    		   COI = 2
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5000424

    R:1:1:1:0
      Dorosoma cepedianum Species
    (7)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 26
      12S = 9
      16S = 12
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5003813

    R:1:1:1:0
      Dorosoma petenense Species
    (8)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 33
      12S = 4
      16S = 7
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5003815

    R:1:1:1:0
      Opisthonema oglinum Species
    (9)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 69
      12S = 2
      16S = 3
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5001030

    R:1:0:0:0
    MZGdb Atlas [ database-version = v2023-m04-01 ];   html-date = 2023-Apr-07









    Fri Apr 7 12:51:42 EDT 2023