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Annelida-Polychaeta of the ICES western North Atlantic

There are 663 species of Annelida-Polychaeta that are commonly found in the ICES western North Atlantic.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 663 total species, 250 of these species (37%) have COI barcodes (from this or any ocean).
  • There are a total of 4219 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the ICES western North Atlantic region):
  • Of the 663 total species, 86 of these species (12%) have ICES western North Atlantic-collected COI barcodes.
  • There are a total of 547 "ICES western North Atlantic-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 663 total species in this region, 413 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the ICES western North Atlantic region, out of a total of 663 possible species:
    • There are COI barcodes for 250 species ( 37% coverage ), of which 86 species have barcodes sampled inside this region ( 12% coverage ).
      •
    • There are 12S barcodes for 18 species ( 2% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 169 species ( 25% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 205 species ( 30% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 137 species ( 20% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).
    Change Region   [ ICES North Atlantic ] [ Baltic Sea ] [ Mediterranean Sea ]
          [ ICES western North Atlantic ] [ US-NE-LME ] [ CA-Scotian ] [ CA-GSL ] [ CA-Newfoundland-shelf ]
          [ ICES eastern North Atlantic ] [ Icelandic-Waters ] [ Faroe-Islands ] [ Norwegian-Sea ] [ Barents-Sea ] [ Celtic-Seas ] [ North-Sea ] [ Iberian-Shelf ]
    -----> Click here to go back to the Group Summary page. <-----


    Annelida-Polychaeta of the ICES western North Atlantic
    MZGdb DATA FILES

    Database-Version:   v2023-m04-01    		 --->   Mode-A   <---

    COI barcodes = 4219
    12S barcodes = 30
    16S barcodes = 756
    18S barcodes = 585
    28S barcodes = 286
    		 Mode-B

    COI barcodes = 547
    12S barcodes = 0
    16S barcodes = 7
    18S barcodes = 7
    28S barcodes = 17
    		 Mode-C

    COI records = 10007
    12S records = 131
    16S records = 2185
    18S records = 1252
    28S records = 798
    		 Mode-D

    COI records = 754
    12S records = 0
    16S records = 7
    18S records = 11
    28S records = 23
    FASTA file MZGdb fasta (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb fasta (mode-B)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb fasta (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb fasta (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    Mothur-formatted
    Taxonomic Hierarchy file

    (paired with FASTA file above)    		 MZGdb Mothur (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb Mothur (mode-B)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb Mothur (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb Mothur (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    MZGdb v3.0

    "full format"

    go to
    Format Description    		CSV

    Excel-friendly full format
    comma-separated-values    		 MZGdb CSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb CSV (mode-B)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb CSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb CSV (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    PSV

    pipe-separated-values    		 MZGdb PSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb PSV (mode-B)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb PSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb PSV (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)


    MZGdb Atlas [ database-version = v2023-m04-01 ];   html-date = 2023-Apr-12









    Wed Apr 12 17:21:25 EDT 2023